Cluster: CGMR036293_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR036293
- CGC Family ID: CGCFAM_00071
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_108538 | k141_108538_2 | 541 | 1599 | + | GT9 |
| CAZyme | k141_108538 | k141_108538_3 | 1705 | 2418 | + | GT2 |
| TC | k141_108538 | k141_108538_4 | 2418 | 3053 | + | 2.A.123.4.1 |
| CAZyme | k141_108538 | k141_108538_5 | 3037 | 4668 | + | GT83 |
Gene ID: k141_108538_2
Type: CAZyme
Location: 541 - 1599 (+)
Type: CAZyme
Location: 541 - 1599 (+)
Gene ID: k141_108538_3
Type: CAZyme
Location: 1705 - 2418 (+)
Type: CAZyme
Location: 1705 - 2418 (+)
Gene ID: k141_108538_4
Type: TC
Location: 2418 - 3053 (+)
Type: TC
Location: 2418 - 3053 (+)
Gene ID: k141_108538_5
Type: CAZyme
Location: 3037 - 4668 (+)
Type: CAZyme
Location: 3037 - 4668 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Flavobacteriales
Family
Weeksellaceae
Genus
Empedobacter
Species
Empedobacter stercoris
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.