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Cluster: CGMR036181_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_22260 k141_22260_15 15440 16369 + GT2
TC k141_22260 k141_22260_16 16376 17815 + 2.A.66.2.23
CAZyme k141_22260 k141_22260_17 17812 18930 + GT4
pfam k141_22260 k141_22260_18 19275 20366 + Exo_endo_phos
pfam k141_22260 k141_22260_19 20439 21515 + Exo_endo_phos
CAZyme k141_22260 k141_22260_20 21521 22705 + GT2
pfam k141_22260 k141_22260_21 22897 24027 - DUF4842
pfam k141_22260 k141_22260_22 24072 25004 - 3Beta_HSD | Epimerase | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_22260 k141_22260_23 25106 26716 - 3.A.1.121.4
pfam k141_22260 k141_22260_24 26755 27609 - Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC k141_22260 k141_22260_25 27697 29667 - 9.B.18.2.1
Gene ID: k141_22260_15
Type: CAZyme
Location: 15440 - 16369 (+)
Gene ID: k141_22260_16
Type: TC
Location: 16376 - 17815 (+)
Gene ID: k141_22260_17
Type: CAZyme
Location: 17812 - 18930 (+)
Gene ID: k141_22260_18
Type: pfam
Location: 19275 - 20366 (+)
Gene ID: k141_22260_19
Type: pfam
Location: 20439 - 21515 (+)
Gene ID: k141_22260_20
Type: CAZyme
Location: 21521 - 22705 (+)
Gene ID: k141_22260_21
Type: pfam
Location: 22897 - 24027 (-)
Gene ID: k141_22260_22
Type: pfam
Location: 24072 - 25004 (-)
Gene ID: k141_22260_23
Type: TC
Location: 25106 - 26716 (-)
Gene ID: k141_22260_24
Type: pfam
Location: 26755 - 27609 (-)
Gene ID: k141_22260_25
Type: TC
Location: 27697 - 29667 (-)

Taxonomic Lineage

Domain
Bacteria

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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