Cluster: CGMR036034_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR036034
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_268316 | k141_268316_4 | 4068 | 7076 | + | GH2 |
| NULL(UNKNOWN) | k141_268316 | k141_268316_5 | 7080 | 7535 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_268316 | k141_268316_6 | 7689 | 9152 | + | 2.A.3.7.4 |
| STP | k141_268316 | k141_268316_7 | 9574 | 9822 | + | PTS-HPr |
| STP | k141_268316 | k141_268316_8 | 10011 | 10253 | + | FeoA |
| TC | k141_268316 | k141_268316_9 | 10293 | 10514 | + | 9.A.8.1.6 |
| TC | k141_268316 | k141_268316_10 | 10638 | 12965 | + | 9.A.8.1.6 |
Gene ID: k141_268316_4
Type: CAZyme
Location: 4068 - 7076 (+)
Type: CAZyme
Location: 4068 - 7076 (+)
Gene ID: k141_268316_5
Type:
Location: 7080 - 7535 (+)
Type:
Location: 7080 - 7535 (+)
Gene ID: k141_268316_6
Type: TC
Location: 7689 - 9152 (+)
Type: TC
Location: 7689 - 9152 (+)
Gene ID: k141_268316_7
Type: STP
Location: 9574 - 9822 (+)
Type: STP
Location: 9574 - 9822 (+)
Gene ID: k141_268316_8
Type: STP
Location: 10011 - 10253 (+)
Type: STP
Location: 10011 - 10253 (+)
Gene ID: k141_268316_9
Type: TC
Location: 10293 - 10514 (+)
Type: TC
Location: 10293 - 10514 (+)
Gene ID: k141_268316_10
Type: TC
Location: 10638 - 12965 (+)
Type: TC
Location: 10638 - 12965 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp905215905
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.