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Cluster: CGMR036034_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_68696 k141_68696_18 17212 17550 - 4.A.3.1.2
TF k141_68696 k141_68696_19 17765 18769 - LacI
TC k141_68696 k141_68696_20 19127 20902 + 4.A.3.1.1
CAZyme k141_68696 k141_68696_21 20969 22408 + GH1
TF k141_68696 k141_68696_22 22670 23707 - LacI
CAZyme k141_68696 k141_68696_23 24049 25491 + GH1
TC k141_68696 k141_68696_24 25668 27428 + 4.A.3.1.1
TF k141_68696 k141_68696_25 27762 28772 - LacI
TC k141_68696 k141_68696_26 29049 30827 + 4.A.3.1.1
CAZyme k141_68696 k141_68696_27 30903 32324 + GH1
Gene ID: k141_68696_18
Type: TC
Location: 17212 - 17550 (-)
Gene ID: k141_68696_19
Type: TF
Location: 17765 - 18769 (-)
Gene ID: k141_68696_20
Type: TC
Location: 19127 - 20902 (+)
Gene ID: k141_68696_21
Type: CAZyme
Location: 20969 - 22408 (+)
Gene ID: k141_68696_22
Type: TF
Location: 22670 - 23707 (-)
Gene ID: k141_68696_23
Type: CAZyme
Location: 24049 - 25491 (+)
Gene ID: k141_68696_24
Type: TC
Location: 25668 - 27428 (+)
Gene ID: k141_68696_25
Type: TF
Location: 27762 - 28772 (-)
Gene ID: k141_68696_26
Type: TC
Location: 29049 - 30827 (+)
Gene ID: k141_68696_27
Type: CAZyme
Location: 30903 - 32324 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_68696_22 vegetarian > omnivore 1.03481 0.02677

🧭 Explore Read Mapping of CGC

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