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Cluster: CGMR036034_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_131548 k141_131548_22 19291 20796 + GH77
CAZyme k141_131548 k141_131548_23 20925 23192 + GT35
TC k141_131548 k141_131548_24 23648 24847 - 3.A.1.1.22
TC k141_131548 k141_131548_25 24916 25755 - 3.A.1.1.45
TC k141_131548 k141_131548_26 25755 26609 - 3.A.1.1.45
TC k141_131548 k141_131548_27 26697 28013 - 3.A.1.1.45
TF k141_131548 k141_131548_28 28320 29039 - GntR
NULL(UNKNOWN) k141_131548 k141_131548_29 29123 29242 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_131548 k141_131548_30 29264 31714 + 4.A.1.1.8
Gene ID: k141_131548_22
Type: CAZyme
Location: 19291 - 20796 (+)
Gene ID: k141_131548_23
Type: CAZyme
Location: 20925 - 23192 (+)
Gene ID: k141_131548_24
Type: TC
Location: 23648 - 24847 (-)
Gene ID: k141_131548_25
Type: TC
Location: 24916 - 25755 (-)
Gene ID: k141_131548_26
Type: TC
Location: 25755 - 26609 (-)
Gene ID: k141_131548_27
Type: TC
Location: 26697 - 28013 (-)
Gene ID: k141_131548_28
Type: TF
Location: 28320 - 29039 (-)
Gene ID: k141_131548_29
Type:
Location: 29123 - 29242 (-)
Gene ID: k141_131548_30
Type: TC
Location: 29264 - 31714 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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