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Cluster: CGMR035943_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_31769 k141_31769_53 57502 60402 + 3.A.3.1.8
TC k141_31769 k141_31769_54 60399 61052 + 3.A.3.1.8
TC k141_31769 k141_31769_55 61066 61734 + 3.A.3.1.8
pfam k141_31769 k141_31769_56 62003 62491 + DUF2975
TF k141_31769 k141_31769_57 62501 62731 + HTH_3
CAZyme k141_31769 k141_31769_58 62916 64082 - GT28
pfam k141_31769 k141_31769_59 64424 66079 + VanW | G5 | PG_binding_4
CAZyme k141_31769 k141_31769_60 66179 67171 + GT2
pfam k141_31769 k141_31769_61 67486 69384 + CN_hydrolase | NAD_synthase
TC k141_31769 k141_31769_62 69821 71266 + 2.A.25.1.9
TC k141_31769 k141_31769_63 71473 72501 + 3.A.1.24.2
TC k141_31769 k141_31769_64 72491 73153 + 3.A.1.24.5
TC k141_31769 k141_31769_65 73195 74049 + 3.A.1.24.5
pfam k141_31769 k141_31769_66 74233 74709 + Y1_Tnp
TC k141_31769 k141_31769_67 75017 77167 + 1.B.52.2.1
Gene ID: k141_31769_53
Type: TC
Location: 57502 - 60402 (+)
Gene ID: k141_31769_54
Type: TC
Location: 60399 - 61052 (+)
Gene ID: k141_31769_55
Type: TC
Location: 61066 - 61734 (+)
Gene ID: k141_31769_56
Type: pfam
Location: 62003 - 62491 (+)
Gene ID: k141_31769_57
Type: TF
Location: 62501 - 62731 (+)
Gene ID: k141_31769_58
Type: CAZyme
Location: 62916 - 64082 (-)
Gene ID: k141_31769_59
Type: pfam
Location: 64424 - 66079 (+)
Gene ID: k141_31769_60
Type: CAZyme
Location: 66179 - 67171 (+)
Gene ID: k141_31769_61
Type: pfam
Location: 67486 - 69384 (+)
Gene ID: k141_31769_62
Type: TC
Location: 69821 - 71266 (+)
Gene ID: k141_31769_63
Type: TC
Location: 71473 - 72501 (+)
Gene ID: k141_31769_64
Type: TC
Location: 72491 - 73153 (+)
Gene ID: k141_31769_65
Type: TC
Location: 73195 - 74049 (+)
Gene ID: k141_31769_66
Type: pfam
Location: 74233 - 74709 (+)
Gene ID: k141_31769_67
Type: TC
Location: 75017 - 77167 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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