Cluster: CGMR035943_CGC21
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR035943
- CGC Family ID: CGCFAM_03790
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_33478 | k141_33478_13 | 13941 | 16016 | + | 1.B.52.2.2 |
| TC | k141_33478 | k141_33478_14 | 16449 | 18494 | + | 1.B.52.2.2 |
| TF | k141_33478 | k141_33478_15 | 18573 | 19448 | - | MerR |
| CAZyme | k141_33478 | k141_33478_16 | 19591 | 20826 | - | GT4 |
| pfam | k141_33478 | k141_33478_17 | 20839 | 21921 | - | Epimerase_2 |
| CAZyme | k141_33478 | k141_33478_18 | 21918 | 23036 | - | GH177 |
Gene ID: k141_33478_13
Type: TC
Location: 13941 - 16016 (+)
Type: TC
Location: 13941 - 16016 (+)
Gene ID: k141_33478_14
Type: TC
Location: 16449 - 18494 (+)
Type: TC
Location: 16449 - 18494 (+)
Gene ID: k141_33478_15
Type: TF
Location: 18573 - 19448 (-)
Type: TF
Location: 18573 - 19448 (-)
Gene ID: k141_33478_16
Type: CAZyme
Location: 19591 - 20826 (-)
Type: CAZyme
Location: 19591 - 20826 (-)
Gene ID: k141_33478_17
Type: pfam
Location: 20839 - 21921 (-)
Type: pfam
Location: 20839 - 21921 (-)
Gene ID: k141_33478_18
Type: CAZyme
Location: 21918 - 23036 (-)
Type: CAZyme
Location: 21918 - 23036 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Clostridium_E
Species
Clostridium_E jeddahense
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.