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Cluster: CGMR035943_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_4872 k141_4872_44 46052 47407 + 3.A.1.1.45
TC k141_4872 k141_4872_45 47540 48382 + 3.A.1.1.45
TC k141_4872 k141_4872_46 48382 49218 + 3.A.1.1.45
TF k141_4872 k141_4872_47 49255 50301 + LacI
CAZyme k141_4872 k141_4872_48 50303 51808 + GH77
CAZyme k141_4872 k141_4872_49 51877 54264 + GT35
NULL(UNKNOWN) k141_4872 k141_4872_50 54683 55243 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_4872 k141_4872_51 55511 56347 - HTH_6
TC k141_4872 k141_4872_52 56614 57834 + 2.A.27.1.1
Gene ID: k141_4872_44
Type: TC
Location: 46052 - 47407 (+)
Gene ID: k141_4872_45
Type: TC
Location: 47540 - 48382 (+)
Gene ID: k141_4872_46
Type: TC
Location: 48382 - 49218 (+)
Gene ID: k141_4872_47
Type: TF
Location: 49255 - 50301 (+)
Gene ID: k141_4872_48
Type: CAZyme
Location: 50303 - 51808 (+)
Gene ID: k141_4872_49
Type: CAZyme
Location: 51877 - 54264 (+)
Gene ID: k141_4872_50
Type:
Location: 54683 - 55243 (+)
Gene ID: k141_4872_51
Type: TF
Location: 55511 - 56347 (-)
Gene ID: k141_4872_52
Type: TC
Location: 56614 - 57834 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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