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Cluster: CGMR035712_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_1596556 k141_1596556_61 58047 59360 + GH39
CAZyme k141_1596556 k141_1596556_62 59445 60752 + GH39
TC k141_1596556 k141_1596556_63 60829 61854 + 9.A.11.1.1
TC k141_1596556 k141_1596556_64 61856 62215 + 9.A.11.1.1
pfam k141_1596556 k141_1596556_65 62407 62898 + Hydrolase_2
pfam k141_1596556 k141_1596556_66 63044 66454 - Cohesin | LRR_5 | LRR_5
TC k141_1596556 k141_1596556_67 66627 67055 + 1.A.22.1.1
pfam k141_1596556 k141_1596556_68 67068 67463 + GtrA_DPMS_TM
TF k141_1596556 k141_1596556_69 67494 68324 - HTH_AraC | HTH_AraC
CAZyme k141_1596556 k141_1596556_70 68453 69751 + GH177
Gene ID: k141_1596556_61
Type: CAZyme
Location: 58047 - 59360 (+)
Gene ID: k141_1596556_62
Type: CAZyme
Location: 59445 - 60752 (+)
Gene ID: k141_1596556_63
Type: TC
Location: 60829 - 61854 (+)
Gene ID: k141_1596556_64
Type: TC
Location: 61856 - 62215 (+)
Gene ID: k141_1596556_65
Type: pfam
Location: 62407 - 62898 (+)
Gene ID: k141_1596556_66
Type: pfam
Location: 63044 - 66454 (-)
Gene ID: k141_1596556_67
Type: TC
Location: 66627 - 67055 (+)
Gene ID: k141_1596556_68
Type: pfam
Location: 67068 - 67463 (+)
Gene ID: k141_1596556_69
Type: TF
Location: 67494 - 68324 (-)
Gene ID: k141_1596556_70
Type: CAZyme
Location: 68453 - 69751 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Oscillospirales
→
Family
Ruminococcaceae
→
Genus
Fumia
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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