Cluster: CGMR035712_CGC16
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR035712
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_417928 | k141_417928_4 | 5216 | 5917 | - | 3.A.1.132.1 |
| TC | k141_417928 | k141_417928_5 | 5914 | 6882 | - | 3.A.1.132.1 |
| CAZyme | k141_417928 | k141_417928_6 | 6970 | 7875 | - | GH43_26 |
| pfam | k141_417928 | k141_417928_7 | 8001 | 8921 | + | S1 |
| NULL(UNKNOWN) | k141_417928 | k141_417928_8 | 8946 | 9992 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_417928 | k141_417928_9 | 10095 | 11282 | - | 9.B.174.1.1 |
| STP | k141_417928 | k141_417928_10 | 11352 | 12560 | - | Peptidase_M23 |
| pfam | k141_417928 | k141_417928_11 | 12576 | 13481 | - | FtsX | FtsX_ECD |
| TC | k141_417928 | k141_417928_12 | 13468 | 14157 | - | 3.A.1.140.1 |
| pfam | k141_417928 | k141_417928_13 | 14237 | 15322 | - | HTH_30 | GGDEF_2 |
| TC | k141_417928 | k141_417928_14 | 15638 | 16429 | - | 3.A.1.34.1 |
| TC | k141_417928 | k141_417928_15 | 16422 | 17300 | - | 3.A.1.34.1 |
| TC | k141_417928 | k141_417928_16 | 17313 | 18290 | - | 3.A.1.34.1 |
| pfam | k141_417928 | k141_417928_17 | 18964 | 20934 | + | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_2 | Choline_bind_3 |
| peptidase | k141_417928 | k141_417928_18 | 20971 | 21936 | - | M15.024 |
| CAZyme | k141_417928 | k141_417928_19 | 21949 | 24198 | - | CBM67 | GH78 |
| CAZyme | k141_417928 | k141_417928_20 | 24211 | 26301 | - | GH3 |
Gene ID: k141_417928_4
Type: TC
Location: 5216 - 5917 (-)
Type: TC
Location: 5216 - 5917 (-)
Gene ID: k141_417928_5
Type: TC
Location: 5914 - 6882 (-)
Type: TC
Location: 5914 - 6882 (-)
Gene ID: k141_417928_6
Type: CAZyme
Location: 6970 - 7875 (-)
Type: CAZyme
Location: 6970 - 7875 (-)
Gene ID: k141_417928_7
Type: pfam
Location: 8001 - 8921 (+)
Type: pfam
Location: 8001 - 8921 (+)
Gene ID: k141_417928_8
Type:
Location: 8946 - 9992 (-)
Type:
Location: 8946 - 9992 (-)
Gene ID: k141_417928_9
Type: TC
Location: 10095 - 11282 (-)
Type: TC
Location: 10095 - 11282 (-)
Gene ID: k141_417928_10
Type: STP
Location: 11352 - 12560 (-)
Type: STP
Location: 11352 - 12560 (-)
Gene ID: k141_417928_11
Type: pfam
Location: 12576 - 13481 (-)
Type: pfam
Location: 12576 - 13481 (-)
Gene ID: k141_417928_12
Type: TC
Location: 13468 - 14157 (-)
Type: TC
Location: 13468 - 14157 (-)
Gene ID: k141_417928_13
Type: pfam
Location: 14237 - 15322 (-)
Type: pfam
Location: 14237 - 15322 (-)
Gene ID: k141_417928_14
Type: TC
Location: 15638 - 16429 (-)
Type: TC
Location: 15638 - 16429 (-)
Gene ID: k141_417928_15
Type: TC
Location: 16422 - 17300 (-)
Type: TC
Location: 16422 - 17300 (-)
Gene ID: k141_417928_16
Type: TC
Location: 17313 - 18290 (-)
Type: TC
Location: 17313 - 18290 (-)
Gene ID: k141_417928_17
Type: pfam
Location: 18964 - 20934 (+)
Type: pfam
Location: 18964 - 20934 (+)
Gene ID: k141_417928_18
Type: peptidase
Location: 20971 - 21936 (-)
Type: peptidase
Location: 20971 - 21936 (-)
Gene ID: k141_417928_19
Type: CAZyme
Location: 21949 - 24198 (-)
Type: CAZyme
Location: 21949 - 24198 (-)
Gene ID: k141_417928_20
Type: CAZyme
Location: 24211 - 26301 (-)
Type: CAZyme
Location: 24211 - 26301 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Fumia
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.