Cluster: CGMR035602_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate: pectin
- Genome ID: CGMR035602
- CGC Family ID: CGCFAM_00079
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_151931 | k141_151931_2 | 3390 | 5582 | + | GH3 |
| CAZyme | k141_151931 | k141_151931_3 | 5617 | 7212 | + | GH144 |
| TC | k141_151931 | k141_151931_4 | 7219 | 10218 | + | 1.B.14.6.1 |
| TC | k141_151931 | k141_151931_5 | 10232 | 11710 | + | 8.A.46.3.2 |
| pfam | k141_151931 | k141_151931_6 | 11746 | 12648 | + | Laminin_G_3 |
| CAZyme | k141_151931 | k141_151931_7 | 12720 | 14387 | + | GH144 |
Gene ID: k141_151931_2
Type: CAZyme
Location: 3390 - 5582 (+)
Type: CAZyme
Location: 3390 - 5582 (+)
Gene ID: k141_151931_3
Type: CAZyme
Location: 5617 - 7212 (+)
Type: CAZyme
Location: 5617 - 7212 (+)
Gene ID: k141_151931_4
Type: TC
Location: 7219 - 10218 (+)
Type: TC
Location: 7219 - 10218 (+)
Gene ID: k141_151931_5
Type: TC
Location: 10232 - 11710 (+)
Type: TC
Location: 10232 - 11710 (+)
Gene ID: k141_151931_6
Type: pfam
Location: 11746 - 12648 (+)
Type: pfam
Location: 11746 - 12648 (+)
Gene ID: k141_151931_7
Type: CAZyme
Location: 12720 - 14387 (+)
Type: CAZyme
Location: 12720 - 14387 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
UBA940
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.