Cluster: CGMR035516_CGC7
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR035516
- CGC Family ID: CGCFAM_01958
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_77870 | k141_77870_54 | 64951 | 65808 | + | 3.A.1.1.25 |
| TC | k141_77870 | k141_77870_55 | 65808 | 66644 | + | 3.A.1.1.18 |
| TC | k141_77870 | k141_77870_56 | 66647 | 68314 | + | 9.B.33.1.1 |
| TF | k141_77870 | k141_77870_57 | 68307 | 69116 | + | HTH_AraC |
| CAZyme | k141_77870 | k141_77870_58 | 69097 | 70242 | + | CE15 |
| TC | k141_77870 | k141_77870_59 | 70578 | 71690 | - | 3.A.1.1.22 |
Gene ID: k141_77870_54
Type: TC
Location: 64951 - 65808 (+)
Type: TC
Location: 64951 - 65808 (+)
Gene ID: k141_77870_55
Type: TC
Location: 65808 - 66644 (+)
Type: TC
Location: 65808 - 66644 (+)
Gene ID: k141_77870_56
Type: TC
Location: 66647 - 68314 (+)
Type: TC
Location: 66647 - 68314 (+)
Gene ID: k141_77870_57
Type: TF
Location: 68307 - 69116 (+)
Type: TF
Location: 68307 - 69116 (+)
Gene ID: k141_77870_58
Type: CAZyme
Location: 69097 - 70242 (+)
Type: CAZyme
Location: 69097 - 70242 (+)
Gene ID: k141_77870_59
Type: TC
Location: 70578 - 71690 (-)
Type: TC
Location: 70578 - 71690 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Sphaerochaetales
Family
Sphaerochaetaceae
Genus
RUG023
Species
RUG023 sp905215015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.