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Cluster: CGMR035516_CGC31

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_141175 k141_141175_17 19449 20651 - 2.A.21.9.1
pfam k141_141175 k141_141175_18 20648 21835 - DNA_pol3_delta2 | DNA_pol3_delta2
pfam k141_141175 k141_141175_19 21835 22353 - Colicin_V
CAZyme k141_141175 k141_141175_20 22350 23402 - GT28
TC k141_141175 k141_141175_21 23558 26116 + 3.A.5.1.3
TF k141_141175 k141_141175_22 26345 27121 - HTH_DeoR
pfam k141_141175 k141_141175_23 27240 28040 + Hydrolase_3
TC k141_141175 k141_141175_24 28037 28696 + 2.A.115.2.12
Gene ID: k141_141175_17
Type: TC
Location: 19449 - 20651 (-)
Gene ID: k141_141175_18
Type: pfam
Location: 20648 - 21835 (-)
Gene ID: k141_141175_19
Type: pfam
Location: 21835 - 22353 (-)
Gene ID: k141_141175_20
Type: CAZyme
Location: 22350 - 23402 (-)
Gene ID: k141_141175_21
Type: TC
Location: 23558 - 26116 (+)
Gene ID: k141_141175_22
Type: TF
Location: 26345 - 27121 (-)
Gene ID: k141_141175_23
Type: pfam
Location: 27240 - 28040 (+)
Gene ID: k141_141175_24
Type: TC
Location: 28037 - 28696 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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