Cluster: CGMR035516_CGC24
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR035516
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_6641 | k141_6641_4 | 3616 | 4353 | - | 3.A.1.3.15 |
| TC | k141_6641 | k141_6641_5 | 4350 | 5015 | - | 3.A.1.3.15 |
| TC | k141_6641 | k141_6641_6 | 5034 | 5855 | - | 3.A.1.3.15 |
| CAZyme | k141_6641 | k141_6641_7 | 6032 | 6889 | + | CE4 |
| CAZyme | k141_6641 | k141_6641_8 | 6882 | 7745 | + | CE4 |
| STP | k141_6641 | k141_6641_9 | 8146 | 8643 | - | HD |
| CAZyme | k141_6641 | k141_6641_10 | 8640 | 9962 | - | GT2 |
| TC | k141_6641 | k141_6641_11 | 10079 | 11896 | - | 3.A.16.1.1 |
Gene ID: k141_6641_4
Type: TC
Location: 3616 - 4353 (-)
Type: TC
Location: 3616 - 4353 (-)
Gene ID: k141_6641_5
Type: TC
Location: 4350 - 5015 (-)
Type: TC
Location: 4350 - 5015 (-)
Gene ID: k141_6641_6
Type: TC
Location: 5034 - 5855 (-)
Type: TC
Location: 5034 - 5855 (-)
Gene ID: k141_6641_7
Type: CAZyme
Location: 6032 - 6889 (+)
Type: CAZyme
Location: 6032 - 6889 (+)
Gene ID: k141_6641_8
Type: CAZyme
Location: 6882 - 7745 (+)
Type: CAZyme
Location: 6882 - 7745 (+)
Gene ID: k141_6641_9
Type: STP
Location: 8146 - 8643 (-)
Type: STP
Location: 8146 - 8643 (-)
Gene ID: k141_6641_10
Type: CAZyme
Location: 8640 - 9962 (-)
Type: CAZyme
Location: 8640 - 9962 (-)
Gene ID: k141_6641_11
Type: TC
Location: 10079 - 11896 (-)
Type: TC
Location: 10079 - 11896 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Sphaerochaetales
Family
Sphaerochaetaceae
Genus
RUG023
Species
RUG023 sp905215015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.