Cluster: CGMR035516_CGC13
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR035516
- CGC Family ID: CGCFAM_08488
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_13248 | k141_13248_103 | 114199 | 115083 | - | 3.A.1.1.29 |
| TC | k141_13248 | k141_13248_104 | 115102 | 115959 | - | 3.A.1.1.10 |
| TC | k141_13248 | k141_13248_105 | 116087 | 117652 | - | 3.A.1.1.9 |
| pfam | k141_13248 | k141_13248_106 | 117879 | 119972 | + | Hepar_II_III_C | Hepar_II_III_N |
| sulfatase | k141_13248 | k141_13248_107 | 119969 | 121426 | + | S1_99 |
| CAZyme | k141_13248 | k141_13248_108 | 121435 | 122541 | + | GH88 |
| CAZyme | k141_13248 | k141_13248_109 | 122543 | 124453 | + | PL12 |
| TF | k141_13248 | k141_13248_110 | 124389 | 126737 | - | HTH_AraC |
| TC | k141_13248 | k141_13248_111 | 126870 | 127802 | + | 3.A.1.1.10 |
| TC | k141_13248 | k141_13248_112 | 127816 | 128721 | + | 3.A.1.1.10 |
| TC | k141_13248 | k141_13248_113 | 128746 | 130365 | + | 3.A.1.1.10 |
| sulfatase | k141_13248 | k141_13248_114 | 130417 | 131883 | + | S1_27;S1_N.C. |
| CAZyme | k141_13248 | k141_13248_115 | 131880 | 133574 | + | GH154 |
| CAZyme | k141_13248 | k141_13248_116 | 133577 | 135334 | + | PL37 |
| CAZyme | k141_13248 | k141_13248_117 | 135331 | 136488 | + | GH88 |
Gene ID: k141_13248_103
Type: TC
Location: 114199 - 115083 (-)
Type: TC
Location: 114199 - 115083 (-)
Gene ID: k141_13248_104
Type: TC
Location: 115102 - 115959 (-)
Type: TC
Location: 115102 - 115959 (-)
Gene ID: k141_13248_105
Type: TC
Location: 116087 - 117652 (-)
Type: TC
Location: 116087 - 117652 (-)
Gene ID: k141_13248_106
Type: pfam
Location: 117879 - 119972 (+)
Type: pfam
Location: 117879 - 119972 (+)
Gene ID: k141_13248_107
Type: sulfatase
Location: 119969 - 121426 (+)
Type: sulfatase
Location: 119969 - 121426 (+)
Gene ID: k141_13248_108
Type: CAZyme
Location: 121435 - 122541 (+)
Type: CAZyme
Location: 121435 - 122541 (+)
Gene ID: k141_13248_109
Type: CAZyme
Location: 122543 - 124453 (+)
Type: CAZyme
Location: 122543 - 124453 (+)
Gene ID: k141_13248_110
Type: TF
Location: 124389 - 126737 (-)
Type: TF
Location: 124389 - 126737 (-)
Gene ID: k141_13248_111
Type: TC
Location: 126870 - 127802 (+)
Type: TC
Location: 126870 - 127802 (+)
Gene ID: k141_13248_112
Type: TC
Location: 127816 - 128721 (+)
Type: TC
Location: 127816 - 128721 (+)
Gene ID: k141_13248_113
Type: TC
Location: 128746 - 130365 (+)
Type: TC
Location: 128746 - 130365 (+)
Gene ID: k141_13248_114
Type: sulfatase
Location: 130417 - 131883 (+)
Type: sulfatase
Location: 130417 - 131883 (+)
Gene ID: k141_13248_115
Type: CAZyme
Location: 131880 - 133574 (+)
Type: CAZyme
Location: 131880 - 133574 (+)
Gene ID: k141_13248_116
Type: CAZyme
Location: 133577 - 135334 (+)
Type: CAZyme
Location: 133577 - 135334 (+)
Gene ID: k141_13248_117
Type: CAZyme
Location: 135331 - 136488 (+)
Type: CAZyme
Location: 135331 - 136488 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Spirochaetota
Class
Spirochaetia
Order
Sphaerochaetales
Family
Sphaerochaetaceae
Genus
RUG023
Species
RUG023 sp905215015
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.