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Cluster: CGMR035482_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_402338 k141_402338_48 42511 43536 + 3.A.1.1.11
TC k141_402338 k141_402338_49 43526 44458 + 3.A.1.1.34
CAZyme k141_402338 k141_402338_50 44539 46296 + GH43_33
pfam k141_402338 k141_402338_51 46314 51392 + Flg_new_2 | Flg_new_2
pfam k141_402338 k141_402338_52 51408 53066 + SASA
CAZyme k141_402338 k141_402338_53 53127 55931 + GH2
CAZyme k141_402338 k141_402338_54 55942 57912 + GH3
CAZyme k141_402338 k141_402338_55 57920 59659 + GH2
Gene ID: k141_402338_48
Type: TC
Location: 42511 - 43536 (+)
Gene ID: k141_402338_49
Type: TC
Location: 43526 - 44458 (+)
Gene ID: k141_402338_50
Type: CAZyme
Location: 44539 - 46296 (+)
Gene ID: k141_402338_51
Type: pfam
Location: 46314 - 51392 (+)
Gene ID: k141_402338_52
Type: pfam
Location: 51408 - 53066 (+)
Gene ID: k141_402338_53
Type: CAZyme
Location: 53127 - 55931 (+)
Gene ID: k141_402338_54
Type: CAZyme
Location: 55942 - 57912 (+)
Gene ID: k141_402338_55
Type: CAZyme
Location: 57920 - 59659 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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