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Cluster: CGMR034886_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_70809 k141_70809_4 1438 3114 - 4.C.1.1.4
pfam k141_70809 k141_70809_5 3266 5485 - DNA_topoisoIV | DNA_gyraseA_C | DNA_gyraseA_C
TC k141_70809 k141_70809_6 5651 6970 - 2.A.1.82.4
TC k141_70809 k141_70809_7 7101 7745 - 1.A.62.2.3
pfam k141_70809 k141_70809_8 7807 8271 - SEC-C | YchJ_M-like
TC k141_70809 k141_70809_9 8345 9922 - 2.A.109.2.3
pfam k141_70809 k141_70809_10 10255 10875 + Lysine_decarbox | LDcluster4
NULL(UNKNOWN) k141_70809 k141_70809_11 10942 11916 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_70809 k141_70809_12 12252 13643 + 2.A.1.3.26
CAZyme k141_70809 k141_70809_13 13712 14491 + GH25
pfam k141_70809 k141_70809_14 14550 15566 + Lactamase_B_2 | Lactamase_B_3
pfam k141_70809 k141_70809_15 15587 16642 + IMS | IMS_HHH | IMS_C | IMS_HHH_1
TC k141_70809 k141_70809_16 17352 17639 + 2.A.1.6.6
Gene ID: k141_70809_4
Type: TC
Location: 1438 - 3114 (-)
Gene ID: k141_70809_5
Type: pfam
Location: 3266 - 5485 (-)
Gene ID: k141_70809_6
Type: TC
Location: 5651 - 6970 (-)
Gene ID: k141_70809_7
Type: TC
Location: 7101 - 7745 (-)
Gene ID: k141_70809_8
Type: pfam
Location: 7807 - 8271 (-)
Gene ID: k141_70809_9
Type: TC
Location: 8345 - 9922 (-)
Gene ID: k141_70809_10
Type: pfam
Location: 10255 - 10875 (+)
Gene ID: k141_70809_11
Type:
Location: 10942 - 11916 (-)
Gene ID: k141_70809_12
Type: TC
Location: 12252 - 13643 (+)
Gene ID: k141_70809_13
Type: CAZyme
Location: 13712 - 14491 (+)
Gene ID: k141_70809_14
Type: pfam
Location: 14550 - 15566 (+)
Gene ID: k141_70809_15
Type: pfam
Location: 15587 - 16642 (+)
Gene ID: k141_70809_16
Type: TC
Location: 17352 - 17639 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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