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Cluster: CGMR034863_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_29644 k141_29644_18 18654 20633 + PL12
pfam k141_29644 k141_29644_19 20656 21744 + Glyco_transf_4 | Glyco_trans_4_2 | Glyco_trans_4_4
pfam k141_29644 k141_29644_20 21748 22935 + Glycos_transf_1 | Glyco_transf_4 | Glyco_trans_1_2 | Glyco_trans_1_4
CAZyme k141_29644 k141_29644_21 22971 24209 + GT4
NULL(UNKNOWN) k141_29644 k141_29644_22 24209 24316 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) k141_29644 k141_29644_23 24291 25439 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_29644 k141_29644_24 25442 26455 + 9.B.18.2.1
pfam k141_29644 k141_29644_25 26502 27635 + Epimerase | Polysacc_synt_C
pfam k141_29644 k141_29644_26 27674 28804 + Epimerase_2
CAZyme k141_29644 k141_29644_27 28861 30006 + GT4
Gene ID: k141_29644_18
Type: CAZyme
Location: 18654 - 20633 (+)
Gene ID: k141_29644_19
Type: pfam
Location: 20656 - 21744 (+)
Gene ID: k141_29644_20
Type: pfam
Location: 21748 - 22935 (+)
Gene ID: k141_29644_21
Type: CAZyme
Location: 22971 - 24209 (+)
Gene ID: k141_29644_22
Type:
Location: 24209 - 24316 (+)
Gene ID: k141_29644_23
Type:
Location: 24291 - 25439 (+)
Gene ID: k141_29644_24
Type: TC
Location: 25442 - 26455 (+)
Gene ID: k141_29644_25
Type: pfam
Location: 26502 - 27635 (+)
Gene ID: k141_29644_26
Type: pfam
Location: 27674 - 28804 (+)
Gene ID: k141_29644_27
Type: CAZyme
Location: 28861 - 30006 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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