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Cluster: CGMR034812_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_185852 k141_185852_6 7005 8084 + GT2
pfam k141_185852 k141_185852_7 8135 9010 + LicD
pfam k141_185852 k141_185852_8 9020 9745 + DNA_alkylation
TC k141_185852 k141_185852_9 10008 10670 + 2.A.87.1.3
TC k141_185852 k141_185852_10 10930 11502 + 3.A.1.26.10
CAZyme k141_185852 k141_185852_11 11795 13222 - GT5
pfam k141_185852 k141_185852_12 13251 14363 - NTP_transferase | Hexapep_GlmU
pfam k141_185852 k141_185852_13 14353 15564 - NTP_transferase | Hexapep_GlmU
CAZyme k141_185852 k141_185852_14 15637 17559 - CBM48 | GH13_9
pfam k141_185852 k141_185852_15 17823 18854 - Gp_dh_N | Gp_dh_C
STP k141_185852 k141_185852_16 19421 20974 + HD
TC k141_185852 k141_185852_17 21605 22855 + 1.A.11.1.4
Gene ID: k141_185852_6
Type: CAZyme
Location: 7005 - 8084 (+)
Gene ID: k141_185852_7
Type: pfam
Location: 8135 - 9010 (+)
Gene ID: k141_185852_8
Type: pfam
Location: 9020 - 9745 (+)
Gene ID: k141_185852_9
Type: TC
Location: 10008 - 10670 (+)
Gene ID: k141_185852_10
Type: TC
Location: 10930 - 11502 (+)
Gene ID: k141_185852_11
Type: CAZyme
Location: 11795 - 13222 (-)
Gene ID: k141_185852_12
Type: pfam
Location: 13251 - 14363 (-)
Gene ID: k141_185852_13
Type: pfam
Location: 14353 - 15564 (-)
Gene ID: k141_185852_14
Type: CAZyme
Location: 15637 - 17559 (-)
Gene ID: k141_185852_15
Type: pfam
Location: 17823 - 18854 (-)
Gene ID: k141_185852_16
Type: STP
Location: 19421 - 20974 (+)
Gene ID: k141_185852_17
Type: TC
Location: 21605 - 22855 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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