Cluster: CGMR034812_CGC4
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR034812
- CGC Family ID: CGCFAM_08501
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_23703 | k141_23703_35 | 31419 | 33833 | - | GH13_42 |
| CAZyme | k141_23703 | k141_23703_36 | 33872 | 35443 | - | CBM26 |
| STP | k141_23703 | k141_23703_37 | 35722 | 36987 | - | AAA |
| TC | k141_23703 | k141_23703_38 | 37723 | 39078 | + | 2.A.38.1.1 |
| TC | k141_23703 | k141_23703_39 | 39089 | 40534 | + | 2.A.38.1.1 |
Gene ID: k141_23703_35
Type: CAZyme
Location: 31419 - 33833 (-)
Type: CAZyme
Location: 31419 - 33833 (-)
Gene ID: k141_23703_36
Type: CAZyme
Location: 33872 - 35443 (-)
Type: CAZyme
Location: 33872 - 35443 (-)
Gene ID: k141_23703_37
Type: STP
Location: 35722 - 36987 (-)
Type: STP
Location: 35722 - 36987 (-)
Gene ID: k141_23703_38
Type: TC
Location: 37723 - 39078 (+)
Type: TC
Location: 37723 - 39078 (+)
Gene ID: k141_23703_39
Type: TC
Location: 39089 - 40534 (+)
Type: TC
Location: 39089 - 40534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.