Cluster: CGMR034812_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034812
- CGC Family ID: CGCFAM_01735
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_171120 | k141_171120_46 | 56000 | 56953 | - | GT2 |
| pfam | k141_171120 | k141_171120_47 | 57290 | 58264 | + | PFK |
| pfam | k141_171120 | k141_171120_48 | 58364 | 59998 | + | MORN |
| TC | k141_171120 | k141_171120_49 | 60001 | 60789 | + | 1.A.23.2.1 |
Gene ID: k141_171120_46
Type: CAZyme
Location: 56000 - 56953 (-)
Type: CAZyme
Location: 56000 - 56953 (-)
Gene ID: k141_171120_47
Type: pfam
Location: 57290 - 58264 (+)
Type: pfam
Location: 57290 - 58264 (+)
Gene ID: k141_171120_48
Type: pfam
Location: 58364 - 59998 (+)
Type: pfam
Location: 58364 - 59998 (+)
Gene ID: k141_171120_49
Type: TC
Location: 60001 - 60789 (+)
Type: TC
Location: 60001 - 60789 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_171120_47 | vegan > omnivore | 1.52281 | 0.04620 |