Cluster: CGMR034812_CGC14
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 6
- Substrate:
- Genome ID: CGMR034812
- CGC Family ID: CGCFAM_00006
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_223740 | k141_223740_124 | 122810 | 123757 | - | GT2 |
| pfam | k141_223740 | k141_223740_125 | 124390 | 124683 | - | DUF1919 |
| CAZyme | k141_223740 | k141_223740_126 | 124992 | 126083 | - | GT4 |
| pfam | k141_223740 | k141_223740_127 | 126088 | 126960 | - | GINT1_N |
| CAZyme | k141_223740 | k141_223740_128 | 126972 | 127688 | - | GT32 |
| pfam | k141_223740 | k141_223740_129 | 127724 | 128269 | - | Hexapep | Hexapep_2 |
| CAZyme | k141_223740 | k141_223740_130 | 128270 | 129157 | - | GT2 |
| CAZyme | k141_223740 | k141_223740_131 | 129160 | 130263 | - | GT4 |
| CAZyme | k141_223740 | k141_223740_132 | 130293 | 130877 | - | GT4 |
| pfam | k141_223740 | k141_223740_133 | 130874 | 131383 | - | Glyco_trans_4_2 |
| TC | k141_223740 | k141_223740_134 | 131373 | 131795 | - | 9.B.18.1.1 |
Gene ID: k141_223740_124
Type: CAZyme
Location: 122810 - 123757 (-)
Type: CAZyme
Location: 122810 - 123757 (-)
Gene ID: k141_223740_125
Type: pfam
Location: 124390 - 124683 (-)
Type: pfam
Location: 124390 - 124683 (-)
Gene ID: k141_223740_126
Type: CAZyme
Location: 124992 - 126083 (-)
Type: CAZyme
Location: 124992 - 126083 (-)
Gene ID: k141_223740_127
Type: pfam
Location: 126088 - 126960 (-)
Type: pfam
Location: 126088 - 126960 (-)
Gene ID: k141_223740_128
Type: CAZyme
Location: 126972 - 127688 (-)
Type: CAZyme
Location: 126972 - 127688 (-)
Gene ID: k141_223740_129
Type: pfam
Location: 127724 - 128269 (-)
Type: pfam
Location: 127724 - 128269 (-)
Gene ID: k141_223740_130
Type: CAZyme
Location: 128270 - 129157 (-)
Type: CAZyme
Location: 128270 - 129157 (-)
Gene ID: k141_223740_131
Type: CAZyme
Location: 129160 - 130263 (-)
Type: CAZyme
Location: 129160 - 130263 (-)
Gene ID: k141_223740_132
Type: CAZyme
Location: 130293 - 130877 (-)
Type: CAZyme
Location: 130293 - 130877 (-)
Gene ID: k141_223740_133
Type: pfam
Location: 130874 - 131383 (-)
Type: pfam
Location: 130874 - 131383 (-)
Gene ID: k141_223740_134
Type: TC
Location: 131373 - 131795 (-)
Type: TC
Location: 131373 - 131795 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_223740_131 | vegetarian > vegan | 1.89231 | 0.04617 |