Cluster: CGMR034812_CGC13
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR034812
- CGC Family ID: CGCFAM_03789
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_18830 | k141_18830_11 | 11972 | 12865 | + | 2.A.115.1.1 |
| pfam | k141_18830 | k141_18830_12 | 12917 | 13981 | - | Glycos_transf_2 | GtrA_DPMS_TM |
| CAZyme | k141_18830 | k141_18830_13 | 14217 | 15923 | + | GH13_28 |
| NULL(UNKNOWN) | k141_18830 | k141_18830_14 | 15941 | 16138 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_18830 | k141_18830_15 | 16135 | 16953 | + | SseB | SseB_C |
| CAZyme | k141_18830 | k141_18830_16 | 17195 | 19399 | + | CBM74 |
Gene ID: k141_18830_11
Type: TC
Location: 11972 - 12865 (+)
Type: TC
Location: 11972 - 12865 (+)
Gene ID: k141_18830_12
Type: pfam
Location: 12917 - 13981 (-)
Type: pfam
Location: 12917 - 13981 (-)
Gene ID: k141_18830_13
Type: CAZyme
Location: 14217 - 15923 (+)
Type: CAZyme
Location: 14217 - 15923 (+)
Gene ID: k141_18830_14
Type:
Location: 15941 - 16138 (+)
Type:
Location: 15941 - 16138 (+)
Gene ID: k141_18830_15
Type: pfam
Location: 16135 - 16953 (+)
Type: pfam
Location: 16135 - 16953 (+)
Gene ID: k141_18830_16
Type: CAZyme
Location: 17195 - 19399 (+)
Type: CAZyme
Location: 17195 - 19399 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.