Cluster: CGMR034812_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034812
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_53423 | k141_53423_40 | 45017 | 45802 | - | CE4 |
| pfam | k141_53423 | k141_53423_41 | 45897 | 47303 | - | tRNA-synt_1e | CysS_C |
| pfam | k141_53423 | k141_53423_42 | 47307 | 47960 | - | Hexapep | SATase_N | Hexapep_2 |
| TC | k141_53423 | k141_53423_43 | 47998 | 48582 | - | 4.F.1.1.7 |
Gene ID: k141_53423_40
Type: CAZyme
Location: 45017 - 45802 (-)
Type: CAZyme
Location: 45017 - 45802 (-)
Gene ID: k141_53423_41
Type: pfam
Location: 45897 - 47303 (-)
Type: pfam
Location: 45897 - 47303 (-)
Gene ID: k141_53423_42
Type: pfam
Location: 47307 - 47960 (-)
Type: pfam
Location: 47307 - 47960 (-)
Gene ID: k141_53423_43
Type: TC
Location: 47998 - 48582 (-)
Type: TC
Location: 47998 - 48582 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Ruminococcus_E
Species
Ruminococcus_E bromii_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_53423_43 | vegetarian > vegan | 1.62514 | 0.01033 |