Cluster: CGMR034611_CGC18
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR034611
- CGC Family ID: CGCFAM_01471
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_103345 | k141_103345_1 | 500 | 1828 | + | 4.A.3.2.8 |
| TC | k141_103345 | k141_103345_2 | 1874 | 3364 | + | 1.B.23.1.3 |
| TC | k141_103345 | k141_103345_3 | 3408 | 3710 | + | 4.A.3.2.4 |
| pfam | k141_103345 | k141_103345_4 | 3726 | 4055 | + | PTS_IIA |
| CAZyme | k141_103345 | k141_103345_5 | 4052 | 5476 | + | GH1 |
| CAZyme | k141_103345 | k141_103345_6 | 5510 | 6289 | + | GH16_21 |
| CAZyme | k141_103345 | k141_103345_7 | 6323 | 8119 | + | GH9 |
Gene ID: k141_103345_1
Type: TC
Location: 500 - 1828 (+)
Type: TC
Location: 500 - 1828 (+)
Gene ID: k141_103345_2
Type: TC
Location: 1874 - 3364 (+)
Type: TC
Location: 1874 - 3364 (+)
Gene ID: k141_103345_3
Type: TC
Location: 3408 - 3710 (+)
Type: TC
Location: 3408 - 3710 (+)
Gene ID: k141_103345_4
Type: pfam
Location: 3726 - 4055 (+)
Type: pfam
Location: 3726 - 4055 (+)
Gene ID: k141_103345_5
Type: CAZyme
Location: 4052 - 5476 (+)
Type: CAZyme
Location: 4052 - 5476 (+)
Gene ID: k141_103345_6
Type: CAZyme
Location: 5510 - 6289 (+)
Type: CAZyme
Location: 5510 - 6289 (+)
Gene ID: k141_103345_7
Type: CAZyme
Location: 6323 - 8119 (+)
Type: CAZyme
Location: 6323 - 8119 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Selenomonadales
Family
Selenomonadaceae
Genus
Selenomonas_A
Species
Selenomonas_A sp900769615
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.