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Cluster: CGMR034611_CGC17

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_104530 k141_104530_12 12063 12818 + 3.A.1.17.1
TC k141_104530 k141_104530_13 12815 13558 + 3.A.1.17.1
TC k141_104530 k141_104530_14 13758 14351 + 3.A.1.25.5
STP k141_104530 k141_104530_15 14354 15040 + CbiA
pfam k141_104530 k141_104530_16 15063 16412 + Aminotran_3
TC k141_104530 k141_104530_17 16847 18544 + 1.B.52.2.1
TC k141_104530 k141_104530_18 18579 19625 + 3.A.1.2.5
pfam k141_104530 k141_104530_19 19725 20036 - DUF805
TC k141_104530 k141_104530_20 20495 20803 + 4.A.3.2.2
TC k141_104530 k141_104530_21 20910 22244 + 4.A.3.2.2
TC k141_104530 k141_104530_22 22370 22693 + 4.A.3.2.2
CAZyme k141_104530 k141_104530_23 22707 24110 + GH1
NULL(UNKNOWN) k141_104530 k141_104530_24 24177 24824 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_104530 k141_104530_25 24865 27525 + CBM23 | CBM27 | GH26
TC k141_104530 k141_104530_26 27683 29413 + 1.B.52.2.1
Gene ID: k141_104530_12
Type: TC
Location: 12063 - 12818 (+)
Gene ID: k141_104530_13
Type: TC
Location: 12815 - 13558 (+)
Gene ID: k141_104530_14
Type: TC
Location: 13758 - 14351 (+)
Gene ID: k141_104530_15
Type: STP
Location: 14354 - 15040 (+)
Gene ID: k141_104530_16
Type: pfam
Location: 15063 - 16412 (+)
Gene ID: k141_104530_17
Type: TC
Location: 16847 - 18544 (+)
Gene ID: k141_104530_18
Type: TC
Location: 18579 - 19625 (+)
Gene ID: k141_104530_19
Type: pfam
Location: 19725 - 20036 (-)
Gene ID: k141_104530_20
Type: TC
Location: 20495 - 20803 (+)
Gene ID: k141_104530_21
Type: TC
Location: 20910 - 22244 (+)
Gene ID: k141_104530_22
Type: TC
Location: 22370 - 22693 (+)
Gene ID: k141_104530_23
Type: CAZyme
Location: 22707 - 24110 (+)
Gene ID: k141_104530_24
Type:
Location: 24177 - 24824 (+)
Gene ID: k141_104530_25
Type: CAZyme
Location: 24865 - 27525 (+)
Gene ID: k141_104530_26
Type: TC
Location: 27683 - 29413 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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