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Cluster: CGMR034523_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_2850 k141_2850_7 7599 9998 + GT51
TC k141_2850 k141_2850_8 10218 12122 + 2.A.108.2.10
TC k141_2850 k141_2850_9 12151 12672 + 2.A.108.2.10
pfam k141_2850 k141_2850_10 12788 14182 + YHS | FtrD-like
TC k141_2850 k141_2850_11 14182 15522 + 3.A.1.122.8
pfam k141_2850 k141_2850_12 15509 16642 + FtsX | MacB_PCD
TC k141_2850 k141_2850_13 16644 17315 + 3.A.1.122.8
Gene ID: k141_2850_7
Type: CAZyme
Location: 7599 - 9998 (+)
Gene ID: k141_2850_8
Type: TC
Location: 10218 - 12122 (+)
Gene ID: k141_2850_9
Type: TC
Location: 12151 - 12672 (+)
Gene ID: k141_2850_10
Type: pfam
Location: 12788 - 14182 (+)
Gene ID: k141_2850_11
Type: TC
Location: 14182 - 15522 (+)
Gene ID: k141_2850_12
Type: pfam
Location: 15509 - 16642 (+)
Gene ID: k141_2850_13
Type: TC
Location: 16644 - 17315 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_2850_8 vegetarian > vegan 1.28877 0.01386
k141_2850_10 vegetarian > vegan 1.89310 0.01386

🧭 Explore Read Mapping of CGC

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