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Cluster: CGMR034523_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_1750 k141_1750_5 4382 5494 + 3.A.1.132.3
pfam k141_1750 k141_1750_6 5567 6196 - His_Phos_1
TC k141_1750 k141_1750_7 6250 7617 - 1.B.17.3.7
TC k141_1750 k141_1750_8 7702 9633 - 3.A.1.122.12
TC k141_1750 k141_1750_9 9652 10833 - 3.A.1.122.1
pfam k141_1750 k141_1750_10 11057 12727 + tRNA-synt_1c | tRNA-synt_1c_C | tRNA-synt_1c_C2
pfam k141_1750 k141_1750_11 12794 13234 + CxxCxxCC
CAZyme k141_1750 k141_1750_12 13379 15469 + GH77
CAZyme k141_1750 k141_1750_13 15481 17670 + CBM48 | GH13_9
CAZyme k141_1750 k141_1750_14 17688 19679 + GH13_11
pfam k141_1750 k141_1750_15 19684 20994 + NTP_transferase | NTP_transf_3 | Hexapep_GlmU
CAZyme k141_1750 k141_1750_16 21085 22515 + GT5
Gene ID: k141_1750_5
Type: TC
Location: 4382 - 5494 (+)
Gene ID: k141_1750_6
Type: pfam
Location: 5567 - 6196 (-)
Gene ID: k141_1750_7
Type: TC
Location: 6250 - 7617 (-)
Gene ID: k141_1750_8
Type: TC
Location: 7702 - 9633 (-)
Gene ID: k141_1750_9
Type: TC
Location: 9652 - 10833 (-)
Gene ID: k141_1750_10
Type: pfam
Location: 11057 - 12727 (+)
Gene ID: k141_1750_11
Type: pfam
Location: 12794 - 13234 (+)
Gene ID: k141_1750_12
Type: CAZyme
Location: 13379 - 15469 (+)
Gene ID: k141_1750_13
Type: CAZyme
Location: 15481 - 17670 (+)
Gene ID: k141_1750_14
Type: CAZyme
Location: 17688 - 19679 (+)
Gene ID: k141_1750_15
Type: pfam
Location: 19684 - 20994 (+)
Gene ID: k141_1750_16
Type: CAZyme
Location: 21085 - 22515 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_1750_5 vegan > omnivore 1.68856 0.00581
k141_1750_11 vegetarian > vegan 1.40449 0.01386

🧭 Explore Read Mapping of CGC

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