Cluster: CGMR034523_CGC18
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034523
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2778 | k141_2778_20 | 24313 | 25977 | - | 4.A.1.1.11 |
| pfam | k141_2778 | k141_2778_21 | 25988 | 26779 | - | Exo_endo_phos |
| CAZyme | k141_2778 | k141_2778_22 | 26789 | 30562 | - | GH77 | GT35 |
| TF | k141_2778 | k141_2778_23 | 30758 | 31471 | + | GntR |
| TC | k141_2778 | k141_2778_24 | 31551 | 32495 | - | 2.A.16.1.2 |
Gene ID: k141_2778_20
Type: TC
Location: 24313 - 25977 (-)
Type: TC
Location: 24313 - 25977 (-)
Gene ID: k141_2778_21
Type: pfam
Location: 25988 - 26779 (-)
Type: pfam
Location: 25988 - 26779 (-)
Gene ID: k141_2778_22
Type: CAZyme
Location: 26789 - 30562 (-)
Type: CAZyme
Location: 26789 - 30562 (-)
Gene ID: k141_2778_23
Type: TF
Location: 30758 - 31471 (+)
Type: TF
Location: 30758 - 31471 (+)
Gene ID: k141_2778_24
Type: TC
Location: 31551 - 32495 (-)
Type: TC
Location: 31551 - 32495 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900755445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_2778_20 | vegan > omnivore | 1.09653 | 0.00581 |