Cluster: CGMR034523_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034523
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2344 | k141_2344_3 | 1128 | 2642 | - | 2.A.21.2.3 |
| pfam | k141_2344 | k141_2344_4 | 2760 | 4235 | + | S1 | RNase_E_G | RNase_E_G_Thio |
| CAZyme | k141_2344 | k141_2344_5 | 4259 | 5083 | + | GT2 |
| TC | k141_2344 | k141_2344_6 | 5122 | 6519 | - | 2.A.66.1.3 |
Gene ID: k141_2344_3
Type: TC
Location: 1128 - 2642 (-)
Type: TC
Location: 1128 - 2642 (-)
Gene ID: k141_2344_4
Type: pfam
Location: 2760 - 4235 (+)
Type: pfam
Location: 2760 - 4235 (+)
Gene ID: k141_2344_5
Type: CAZyme
Location: 4259 - 5083 (+)
Type: CAZyme
Location: 4259 - 5083 (+)
Gene ID: k141_2344_6
Type: TC
Location: 5122 - 6519 (-)
Type: TC
Location: 5122 - 6519 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900755445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.