Cluster: CGMR034523_CGC15
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034523
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_10029 | k141_10029_18 | 17515 | 20541 | - | GH2 |
| pfam | k141_10029 | k141_10029_19 | 20661 | 21860 | - | PMI_typeI_cat | MPI_cupin_dom |
| TC | k141_10029 | k141_10029_20 | 21933 | 22433 | - | 4.A.1.1.1 |
| TC | k141_10029 | k141_10029_21 | 22493 | 24220 | - | 8.A.7.1.1 |
| TC | k141_10029 | k141_10029_22 | 24299 | 24556 | - | 8.A.8.1.1 |
Gene ID: k141_10029_18
Type: CAZyme
Location: 17515 - 20541 (-)
Type: CAZyme
Location: 17515 - 20541 (-)
Gene ID: k141_10029_19
Type: pfam
Location: 20661 - 21860 (-)
Type: pfam
Location: 20661 - 21860 (-)
Gene ID: k141_10029_20
Type: TC
Location: 21933 - 22433 (-)
Type: TC
Location: 21933 - 22433 (-)
Gene ID: k141_10029_21
Type: TC
Location: 22493 - 24220 (-)
Type: TC
Location: 22493 - 24220 (-)
Gene ID: k141_10029_22
Type: TC
Location: 24299 - 24556 (-)
Type: TC
Location: 24299 - 24556 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900755445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_10029_20 | vegan > omnivore | 2.04380 | 0.00581 |
| k141_10029_20 | vegetarian > omnivore | 1.50837 | 0.00180 |