Cluster: CGMR034523_CGC11
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034523
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_986 | k141_986_2 | 184 | 1266 | + | 9.B.146.1.6 |
| pfam | k141_986 | k141_986_3 | 1329 | 2642 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | k141_986 | k141_986_4 | 2658 | 3842 | + | 2.A.103.1.1 |
| CAZyme | k141_986 | k141_986_5 | 3851 | 4903 | + | GT28 |
Gene ID: k141_986_2
Type: TC
Location: 184 - 1266 (+)
Type: TC
Location: 184 - 1266 (+)
Gene ID: k141_986_3
Type: pfam
Location: 1329 - 2642 (+)
Type: pfam
Location: 1329 - 2642 (+)
Gene ID: k141_986_4
Type: TC
Location: 2658 - 3842 (+)
Type: TC
Location: 2658 - 3842 (+)
Gene ID: k141_986_5
Type: CAZyme
Location: 3851 - 4903 (+)
Type: CAZyme
Location: 3851 - 4903 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp900755445
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_986_2 | vegetarian > vegan | 1.24780 | 0.01386 |