Cluster: CGMR034488_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR034488
- CGC Family ID: CGCFAM_01353
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_146291 | k141_146291_1 | 1 | 999 | + | 3.A.1.103.1 |
| CAZyme | k141_146291 | k141_146291_2 | 1006 | 1890 | + | GT2 |
| pfam | k141_146291 | k141_146291_3 | 1887 | 2765 | + | Ubie_methyltran | MTS | MetW | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| NULL(UNKNOWN) | k141_146291 | k141_146291_4 | 2782 | 4572 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_146291 | k141_146291_5 | 4583 | 5422 | + | GT2 |
Gene ID: k141_146291_1
Type: TC
Location: 1 - 999 (+)
Type: TC
Location: 1 - 999 (+)
Gene ID: k141_146291_2
Type: CAZyme
Location: 1006 - 1890 (+)
Type: CAZyme
Location: 1006 - 1890 (+)
Gene ID: k141_146291_3
Type: pfam
Location: 1887 - 2765 (+)
Type: pfam
Location: 1887 - 2765 (+)
Gene ID: k141_146291_4
Type:
Location: 2782 - 4572 (+)
Type:
Location: 2782 - 4572 (+)
Gene ID: k141_146291_5
Type: CAZyme
Location: 4583 - 5422 (+)
Type: CAZyme
Location: 4583 - 5422 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Chiayiivirga
Species
Chiayiivirga sp023438325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.