Cluster: CGMR034488_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034488
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_381516 | k141_381516_1 | 3 | 896 | - | GT4 |
| pfam | k141_381516 | k141_381516_2 | 934 | 1134 | - | zf-CHCC |
| NULL(UNKNOWN) | k141_381516 | k141_381516_3 | 1175 | 1732 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_381516 | k141_381516_4 | 1729 | 2727 | + | 3.A.1.6.1 |
| TC | k141_381516 | k141_381516_5 | 2749 | 3615 | + | 3.A.1.6.1 |
Gene ID: k141_381516_1
Type: CAZyme
Location: 3 - 896 (-)
Type: CAZyme
Location: 3 - 896 (-)
Gene ID: k141_381516_2
Type: pfam
Location: 934 - 1134 (-)
Type: pfam
Location: 934 - 1134 (-)
Gene ID: k141_381516_3
Type:
Location: 1175 - 1732 (+)
Type:
Location: 1175 - 1732 (+)
Gene ID: k141_381516_4
Type: TC
Location: 1729 - 2727 (+)
Type: TC
Location: 1729 - 2727 (+)
Gene ID: k141_381516_5
Type: TC
Location: 2749 - 3615 (+)
Type: TC
Location: 2749 - 3615 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Xanthomonadales
Family
Xanthomonadaceae
Genus
Chiayiivirga
Species
Chiayiivirga sp023438325
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.