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Cluster: CGMR034488_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_274466 k141_274466_14 12177 13205 + GT4
pfam k141_274466 k141_274466_15 13243 13947 + DUF2461
pfam k141_274466 k141_274466_16 13964 15334 - UPF0004 | TRAM | Radical_SAM
CAZyme k141_274466 k141_274466_17 15500 16402 + GH23
peptidase k141_274466 k141_274466_18 16404 17603 - S01.UPC
TC k141_274466 k141_274466_19 17781 18383 + 3.E.2.1.1
TC k141_274466 k141_274466_20 18383 19639 + 3.E.2.1.1
pfam k141_274466 k141_274466_21 19632 20351 + Cytochrom_C1 | Cytochrom_C1
TC k141_274466 k141_274466_22 20419 21060 + 1.A.12.3.1
pfam k141_274466 k141_274466_23 21057 21491 + SspB
pfam k141_274466 k141_274466_24 21502 21885 - DUF3301
TC k141_274466 k141_274466_25 22065 24341 + 3.D.4.10.1
Gene ID: k141_274466_14
Type: CAZyme
Location: 12177 - 13205 (+)
Gene ID: k141_274466_15
Type: pfam
Location: 13243 - 13947 (+)
Gene ID: k141_274466_16
Type: pfam
Location: 13964 - 15334 (-)
Gene ID: k141_274466_17
Type: CAZyme
Location: 15500 - 16402 (+)
Gene ID: k141_274466_18
Type: peptidase
Location: 16404 - 17603 (-)
Gene ID: k141_274466_19
Type: TC
Location: 17781 - 18383 (+)
Gene ID: k141_274466_20
Type: TC
Location: 18383 - 19639 (+)
Gene ID: k141_274466_21
Type: pfam
Location: 19632 - 20351 (+)
Gene ID: k141_274466_22
Type: TC
Location: 20419 - 21060 (+)
Gene ID: k141_274466_23
Type: pfam
Location: 21057 - 21491 (+)
Gene ID: k141_274466_24
Type: pfam
Location: 21502 - 21885 (-)
Gene ID: k141_274466_25
Type: TC
Location: 22065 - 24341 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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