Cluster: CGMR034262_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034262
- CGC Family ID: CGCFAM_00465
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_39902 | k141_39902_35 | 36790 | 39879 | + | 2.A.6.3.5 |
| pfam | k141_39902 | k141_39902_36 | 39882 | 40829 | + | RNase_HII |
| pfam | k141_39902 | k141_39902_37 | 40832 | 41680 | + | YdjC |
| TC | k141_39902 | k141_39902_38 | 41718 | 42752 | + | 4.D.2.1.4 |
| pfam | k141_39902 | k141_39902_39 | 42801 | 43730 | + | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd |
| CAZyme | k141_39902 | k141_39902_40 | 43730 | 45289 | + | GT83 |
Gene ID: k141_39902_35
Type: TC
Location: 36790 - 39879 (+)
Type: TC
Location: 36790 - 39879 (+)
Gene ID: k141_39902_36
Type: pfam
Location: 39882 - 40829 (+)
Type: pfam
Location: 39882 - 40829 (+)
Gene ID: k141_39902_37
Type: pfam
Location: 40832 - 41680 (+)
Type: pfam
Location: 40832 - 41680 (+)
Gene ID: k141_39902_38
Type: TC
Location: 41718 - 42752 (+)
Type: TC
Location: 41718 - 42752 (+)
Gene ID: k141_39902_39
Type: pfam
Location: 42801 - 43730 (+)
Type: pfam
Location: 42801 - 43730 (+)
Gene ID: k141_39902_40
Type: CAZyme
Location: 43730 - 45289 (+)
Type: CAZyme
Location: 43730 - 45289 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.