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Cluster: CGMR034121_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_146349 k141_146349_54 64201 68535 - CBM32 | PL35
NULL(UNKNOWN) k141_146349 k141_146349_55 68551 71154 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_146349 k141_146349_56 71159 72763 - SLH | SLH | SLH
TC k141_146349 k141_146349_57 72784 73653 - 3.A.1.1.10
TC k141_146349 k141_146349_58 73677 74606 - 3.A.1.1.10
TF k141_146349 k141_146349_59 74587 76863 - HTH_AraC
pfam k141_146349 k141_146349_60 77399 77743 + 23S_rRNA_IVP
TC k141_146349 k141_146349_61 77990 80437 - 3.A.9.1.2
Gene ID: k141_146349_54
Type: CAZyme
Location: 64201 - 68535 (-)
Gene ID: k141_146349_55
Type:
Location: 68551 - 71154 (-)
Gene ID: k141_146349_56
Type: pfam
Location: 71159 - 72763 (-)
Gene ID: k141_146349_57
Type: TC
Location: 72784 - 73653 (-)
Gene ID: k141_146349_58
Type: TC
Location: 73677 - 74606 (-)
Gene ID: k141_146349_59
Type: TF
Location: 74587 - 76863 (-)
Gene ID: k141_146349_60
Type: pfam
Location: 77399 - 77743 (+)
Gene ID: k141_146349_61
Type: TC
Location: 77990 - 80437 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
RGIG4708
→
Species
RGIG4708 sp934454585

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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