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Cluster: CGMR034121_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_37022 k141_37022_44 47113 48942 + GH127
STP k141_37022 k141_37022_45 48971 50389 + SBP_bac_1
pfam k141_37022 k141_37022_46 50413 52026 + F5_F8_type_C | F5_F8_type_C | F5_F8_type_C | F5_F8_type_C_2 | F5_F8_type_C_2
CAZyme k141_37022 k141_37022_47 52111 55791 + GH39
pfam k141_37022 k141_37022_48 55814 58981 + SLH | SLH | SLH | F5_F8_type_C | F5_F8_type_C | F5_F8_type_C_2 | F5_F8_type_C_2
pfam k141_37022 k141_37022_49 58994 61615 + SLH
CAZyme k141_37022 k141_37022_50 61635 65864 + CBM9 | GH39
TC k141_37022 k141_37022_51 65881 66801 + 3.A.1.1.20
TC k141_37022 k141_37022_52 66822 67733 + 3.A.1.1.34
NULL(UNKNOWN) k141_37022 k141_37022_53 67846 68685 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_37022 k141_37022_54 68743 69441 - PNP_UDP_1
TC k141_37022 k141_37022_55 69632 70462 + 3.A.1.3.25
TC k141_37022 k141_37022_56 70538 71224 + 3.A.1.3.25
TC k141_37022 k141_37022_57 71202 71933 + 3.A.1.3.25
CAZyme k141_37022 k141_37022_58 72030 74123 + CBM67 | GH78
Gene ID: k141_37022_44
Type: CAZyme
Location: 47113 - 48942 (+)
Gene ID: k141_37022_45
Type: STP
Location: 48971 - 50389 (+)
Gene ID: k141_37022_46
Type: pfam
Location: 50413 - 52026 (+)
Gene ID: k141_37022_47
Type: CAZyme
Location: 52111 - 55791 (+)
Gene ID: k141_37022_48
Type: pfam
Location: 55814 - 58981 (+)
Gene ID: k141_37022_49
Type: pfam
Location: 58994 - 61615 (+)
Gene ID: k141_37022_50
Type: CAZyme
Location: 61635 - 65864 (+)
Gene ID: k141_37022_51
Type: TC
Location: 65881 - 66801 (+)
Gene ID: k141_37022_52
Type: TC
Location: 66822 - 67733 (+)
Gene ID: k141_37022_53
Type:
Location: 67846 - 68685 (+)
Gene ID: k141_37022_54
Type: pfam
Location: 68743 - 69441 (-)
Gene ID: k141_37022_55
Type: TC
Location: 69632 - 70462 (+)
Gene ID: k141_37022_56
Type: TC
Location: 70538 - 71224 (+)
Gene ID: k141_37022_57
Type: TC
Location: 71202 - 71933 (+)
Gene ID: k141_37022_58
Type: CAZyme
Location: 72030 - 74123 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UMGS1810
→
Family
UMGS1810
→
Genus
RGIG4708
→
Species
RGIG4708 sp934454585

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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