Cluster: CGMR034121_CGC5
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR034121
- CGC Family ID: CGCFAM_05277
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_208229 | k141_208229_17 | 18589 | 19734 | + | 3.A.1.4.10 |
| TC | k141_208229 | k141_208229_18 | 19875 | 20738 | + | 3.A.1.4.10 |
| TC | k141_208229 | k141_208229_19 | 20744 | 21901 | + | 3.A.1.4.8 |
| TC | k141_208229 | k141_208229_20 | 21908 | 22681 | + | 3.A.1.4.10 |
| TC | k141_208229 | k141_208229_21 | 22702 | 23427 | + | 3.A.1.4.10 |
| TF | k141_208229 | k141_208229_22 | 23478 | 24308 | - | HTH_AraC | HTH_AraC |
| pfam | k141_208229 | k141_208229_23 | 24435 | 25286 | + | AP_endonuc_2 |
| CAZyme | k141_208229 | k141_208229_24 | 25301 | 26359 | + | GH179 |
Gene ID: k141_208229_17
Type: TC
Location: 18589 - 19734 (+)
Type: TC
Location: 18589 - 19734 (+)
Gene ID: k141_208229_18
Type: TC
Location: 19875 - 20738 (+)
Type: TC
Location: 19875 - 20738 (+)
Gene ID: k141_208229_19
Type: TC
Location: 20744 - 21901 (+)
Type: TC
Location: 20744 - 21901 (+)
Gene ID: k141_208229_20
Type: TC
Location: 21908 - 22681 (+)
Type: TC
Location: 21908 - 22681 (+)
Gene ID: k141_208229_21
Type: TC
Location: 22702 - 23427 (+)
Type: TC
Location: 22702 - 23427 (+)
Gene ID: k141_208229_22
Type: TF
Location: 23478 - 24308 (-)
Type: TF
Location: 23478 - 24308 (-)
Gene ID: k141_208229_23
Type: pfam
Location: 24435 - 25286 (+)
Type: pfam
Location: 24435 - 25286 (+)
Gene ID: k141_208229_24
Type: CAZyme
Location: 25301 - 26359 (+)
Type: CAZyme
Location: 25301 - 26359 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
RGIG4708
Species
RGIG4708 sp934454585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.