Cluster: CGMR034121_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR034121
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_28149 | k141_28149_19 | 34424 | 37222 | - | GH39 |
| pfam | k141_28149 | k141_28149_20 | 37241 | 40507 | - | Big_5 |
| CAZyme | k141_28149 | k141_28149_21 | 40533 | 44066 | - | GH39 |
| TC | k141_28149 | k141_28149_22 | 44088 | 44999 | - | 3.A.1.1.34 |
| TC | k141_28149 | k141_28149_23 | 45014 | 45925 | - | 3.A.1.1.20 |
| STP | k141_28149 | k141_28149_24 | 45956 | 47377 | - | SBP_bac_1 |
| TF | k141_28149 | k141_28149_25 | 47631 | 48446 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_28149 | k141_28149_26 | 48581 | 51142 | - | GH2 |
Gene ID: k141_28149_19
Type: CAZyme
Location: 34424 - 37222 (-)
Type: CAZyme
Location: 34424 - 37222 (-)
Gene ID: k141_28149_20
Type: pfam
Location: 37241 - 40507 (-)
Type: pfam
Location: 37241 - 40507 (-)
Gene ID: k141_28149_21
Type: CAZyme
Location: 40533 - 44066 (-)
Type: CAZyme
Location: 40533 - 44066 (-)
Gene ID: k141_28149_22
Type: TC
Location: 44088 - 44999 (-)
Type: TC
Location: 44088 - 44999 (-)
Gene ID: k141_28149_23
Type: TC
Location: 45014 - 45925 (-)
Type: TC
Location: 45014 - 45925 (-)
Gene ID: k141_28149_24
Type: STP
Location: 45956 - 47377 (-)
Type: STP
Location: 45956 - 47377 (-)
Gene ID: k141_28149_25
Type: TF
Location: 47631 - 48446 (+)
Type: TF
Location: 47631 - 48446 (+)
Gene ID: k141_28149_26
Type: CAZyme
Location: 48581 - 51142 (-)
Type: CAZyme
Location: 48581 - 51142 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
RGIG4708
Species
RGIG4708 sp934454585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.