Cluster: CGMR034121_CGC10
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 5
- Substrate:
- Genome ID: CGMR034121
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_406722 | k141_406722_8 | 7119 | 8660 | - | GH28 |
| CAZyme | k141_406722 | k141_406722_9 | 8674 | 10233 | - | GH28 |
| NULL(UNKNOWN) | k141_406722 | k141_406722_10 | 10246 | 12894 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_406722 | k141_406722_11 | 12901 | 14529 | - | SLH | SLH | SLH |
| CAZyme | k141_406722 | k141_406722_12 | 14531 | 16825 | - | GH39 |
| pfam | k141_406722 | k141_406722_13 | 17089 | 19413 | - | Big_5 |
| pfam | k141_406722 | k141_406722_14 | 19426 | 21423 | - | Big_5 |
| CAZyme | k141_406722 | k141_406722_15 | 21443 | 24817 | - | GH39 |
| TC | k141_406722 | k141_406722_16 | 24828 | 25715 | - | 3.A.1.1.20 |
| TC | k141_406722 | k141_406722_17 | 25729 | 26652 | - | 3.A.1.1.20 |
| TC | k141_406722 | k141_406722_18 | 26682 | 28064 | - | 3.A.1.1.41 |
| NULL(UNKNOWN) | k141_406722 | k141_406722_19 | 28251 | 29114 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_406722 | k141_406722_20 | 29128 | 30678 | + | HTH_AraC | HTH_AraC |
| TC | k141_406722 | k141_406722_21 | 30690 | 32414 | + | 8.A.59.2.1 |
| TC | k141_406722 | k141_406722_22 | 32482 | 33318 | + | 2.A.115.1.5 |
| CAZyme | k141_406722 | k141_406722_23 | 33513 | 34676 | - | GH105 |
Gene ID: k141_406722_8
Type: CAZyme
Location: 7119 - 8660 (-)
Type: CAZyme
Location: 7119 - 8660 (-)
Gene ID: k141_406722_9
Type: CAZyme
Location: 8674 - 10233 (-)
Type: CAZyme
Location: 8674 - 10233 (-)
Gene ID: k141_406722_10
Type:
Location: 10246 - 12894 (-)
Type:
Location: 10246 - 12894 (-)
Gene ID: k141_406722_11
Type: pfam
Location: 12901 - 14529 (-)
Type: pfam
Location: 12901 - 14529 (-)
Gene ID: k141_406722_12
Type: CAZyme
Location: 14531 - 16825 (-)
Type: CAZyme
Location: 14531 - 16825 (-)
Gene ID: k141_406722_13
Type: pfam
Location: 17089 - 19413 (-)
Type: pfam
Location: 17089 - 19413 (-)
Gene ID: k141_406722_14
Type: pfam
Location: 19426 - 21423 (-)
Type: pfam
Location: 19426 - 21423 (-)
Gene ID: k141_406722_15
Type: CAZyme
Location: 21443 - 24817 (-)
Type: CAZyme
Location: 21443 - 24817 (-)
Gene ID: k141_406722_16
Type: TC
Location: 24828 - 25715 (-)
Type: TC
Location: 24828 - 25715 (-)
Gene ID: k141_406722_17
Type: TC
Location: 25729 - 26652 (-)
Type: TC
Location: 25729 - 26652 (-)
Gene ID: k141_406722_18
Type: TC
Location: 26682 - 28064 (-)
Type: TC
Location: 26682 - 28064 (-)
Gene ID: k141_406722_19
Type:
Location: 28251 - 29114 (+)
Type:
Location: 28251 - 29114 (+)
Gene ID: k141_406722_20
Type: TF
Location: 29128 - 30678 (+)
Type: TF
Location: 29128 - 30678 (+)
Gene ID: k141_406722_21
Type: TC
Location: 30690 - 32414 (+)
Type: TC
Location: 30690 - 32414 (+)
Gene ID: k141_406722_22
Type: TC
Location: 32482 - 33318 (+)
Type: TC
Location: 32482 - 33318 (+)
Gene ID: k141_406722_23
Type: CAZyme
Location: 33513 - 34676 (-)
Type: CAZyme
Location: 33513 - 34676 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UMGS1810
Family
UMGS1810
Genus
RGIG4708
Species
RGIG4708 sp934454585
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.