Cluster: CGMR033372_CGC9
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR033372
- CGC Family ID: CGCFAM_00199
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_12786 | k141_12786_34 | 26683 | 28446 | - | GH13_4 |
| CAZyme | k141_12786 | k141_12786_35 | 28537 | 30723 | - | GH36 |
| TC | k141_12786 | k141_12786_36 | 30768 | 31610 | - | 3.A.1.1.28 |
| TC | k141_12786 | k141_12786_37 | 31610 | 32491 | - | 3.A.1.1.28 |
| TC | k141_12786 | k141_12786_38 | 32534 | 33817 | - | 3.A.1.1.28 |
| TF | k141_12786 | k141_12786_39 | 34053 | 34919 | + | HTH_AraC | HTH_AraC |
| TC | k141_12786 | k141_12786_40 | 35069 | 35731 | + | 1.C.113.1.3 |
Gene ID: k141_12786_34
Type: CAZyme
Location: 26683 - 28446 (-)
Type: CAZyme
Location: 26683 - 28446 (-)
Gene ID: k141_12786_35
Type: CAZyme
Location: 28537 - 30723 (-)
Type: CAZyme
Location: 28537 - 30723 (-)
Gene ID: k141_12786_36
Type: TC
Location: 30768 - 31610 (-)
Type: TC
Location: 30768 - 31610 (-)
Gene ID: k141_12786_37
Type: TC
Location: 31610 - 32491 (-)
Type: TC
Location: 31610 - 32491 (-)
Gene ID: k141_12786_38
Type: TC
Location: 32534 - 33817 (-)
Type: TC
Location: 32534 - 33817 (-)
Gene ID: k141_12786_39
Type: TF
Location: 34053 - 34919 (+)
Type: TF
Location: 34053 - 34919 (+)
Gene ID: k141_12786_40
Type: TC
Location: 35069 - 35731 (+)
Type: TC
Location: 35069 - 35731 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A amylophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.