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Cluster: CGMR033372_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_109956 k141_109956_6 5054 7000 + GH2
pfam k141_109956 k141_109956_7 6984 7949 + Bgal_small_N
TC k141_109956 k141_109956_8 8048 8800 + 2.A.102.3.1
pfam k141_109956 k141_109956_9 8879 9523 + FTCD_C
pfam k141_109956 k141_109956_10 9575 10426 + THF_DHG_CYH | THF_DHG_CYH_C
TC k141_109956 k141_109956_11 10447 11814 + 2.A.66.1.26
STP k141_109956 k141_109956_12 11840 14995 + GGDEF | HATPase_c | HisKA | Response_reg
pfam k141_109956 k141_109956_13 15027 16016 + RelA_SpoT
TC k141_109956 k141_109956_14 16149 17546 + 2.A.25.1.5
Gene ID: k141_109956_6
Type: CAZyme
Location: 5054 - 7000 (+)
Gene ID: k141_109956_7
Type: pfam
Location: 6984 - 7949 (+)
Gene ID: k141_109956_8
Type: TC
Location: 8048 - 8800 (+)
Gene ID: k141_109956_9
Type: pfam
Location: 8879 - 9523 (+)
Gene ID: k141_109956_10
Type: pfam
Location: 9575 - 10426 (+)
Gene ID: k141_109956_11
Type: TC
Location: 10447 - 11814 (+)
Gene ID: k141_109956_12
Type: STP
Location: 11840 - 14995 (+)
Gene ID: k141_109956_13
Type: pfam
Location: 15027 - 16016 (+)
Gene ID: k141_109956_14
Type: TC
Location: 16149 - 17546 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Dorea_A
→
Species
Dorea_A amylophila

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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