Cluster: CGMR033372_CGC22
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR033372
- CGC Family ID: CGCFAM_05198
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_49728 | k141_49728_2 | 803 | 2305 | + | GH77 |
| TC | k141_49728 | k141_49728_3 | 2876 | 3787 | + | 2.A.4.7.2 |
| pfam | k141_49728 | k141_49728_4 | 3898 | 5319 | - | DUF512 | PDZ_6 | Radical_SAM_2 |
| TC | k141_49728 | k141_49728_5 | 5611 | 7419 | + | 2.A.58.2.2 |
| TF | k141_49728 | k141_49728_6 | 7531 | 8400 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_49728 | k141_49728_7 | 8614 | 10872 | + | GT35 |
Gene ID: k141_49728_2
Type: CAZyme
Location: 803 - 2305 (+)
Type: CAZyme
Location: 803 - 2305 (+)
Gene ID: k141_49728_3
Type: TC
Location: 2876 - 3787 (+)
Type: TC
Location: 2876 - 3787 (+)
Gene ID: k141_49728_4
Type: pfam
Location: 3898 - 5319 (-)
Type: pfam
Location: 3898 - 5319 (-)
Gene ID: k141_49728_5
Type: TC
Location: 5611 - 7419 (+)
Type: TC
Location: 5611 - 7419 (+)
Gene ID: k141_49728_6
Type: TF
Location: 7531 - 8400 (-)
Type: TF
Location: 7531 - 8400 (-)
Gene ID: k141_49728_7
Type: CAZyme
Location: 8614 - 10872 (+)
Type: CAZyme
Location: 8614 - 10872 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A amylophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_49728_5 | vegan > omnivore | 1.19413 | 0.04353 |