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Cluster: CGMR033372_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_65645 k141_65645_11 14866 15705 - 3.A.1.1.45
TC k141_65645 k141_65645_12 15705 16547 - 3.A.1.1.45
TC k141_65645 k141_65645_13 16676 17974 - 3.A.1.1.45
STP k141_65645 k141_65645_14 18094 19422 - SBP_bac_1
TC k141_65645 k141_65645_15 19364 21142 - 8.A.59.2.1
TF k141_65645 k141_65645_16 21139 22731 - HTH_AraC | HTH_AraC
CAZyme k141_65645 k141_65645_17 22995 24482 - GH77
TC k141_65645 k141_65645_18 24585 27122 - 3.A.3.5.15
Gene ID: k141_65645_11
Type: TC
Location: 14866 - 15705 (-)
Gene ID: k141_65645_12
Type: TC
Location: 15705 - 16547 (-)
Gene ID: k141_65645_13
Type: TC
Location: 16676 - 17974 (-)
Gene ID: k141_65645_14
Type: STP
Location: 18094 - 19422 (-)
Gene ID: k141_65645_15
Type: TC
Location: 19364 - 21142 (-)
Gene ID: k141_65645_16
Type: TF
Location: 21139 - 22731 (-)
Gene ID: k141_65645_17
Type: CAZyme
Location: 22995 - 24482 (-)
Gene ID: k141_65645_18
Type: TC
Location: 24585 - 27122 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Lachnospirales
→
Family
Lachnospiraceae
→
Genus
Dorea_A
→
Species
Dorea_A amylophila

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_65645_12 vegetarian > vegan 1.00669 0.00110

🧭 Explore Read Mapping of CGC

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