Cluster: CGMR033372_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR033372
- CGC Family ID: CGCFAM_00161
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_13074 | k141_13074_4 | 1345 | 2019 | + | GT26 |
| pfam | k141_13074 | k141_13074_5 | 2233 | 3321 | + | HTH_30 | GGDEF_2 |
| TC | k141_13074 | k141_13074_6 | 3338 | 4024 | + | 3.A.1.140.1 |
| pfam | k141_13074 | k141_13074_7 | 4014 | 4922 | + | FtsX | FtsX_ECD |
| TC | k141_13074 | k141_13074_8 | 4950 | 6110 | + | 1.A.34.1.3 |
| TC | k141_13074 | k141_13074_9 | 6142 | 7317 | + | 9.B.174.1.2 |
Gene ID: k141_13074_4
Type: CAZyme
Location: 1345 - 2019 (+)
Type: CAZyme
Location: 1345 - 2019 (+)
Gene ID: k141_13074_5
Type: pfam
Location: 2233 - 3321 (+)
Type: pfam
Location: 2233 - 3321 (+)
Gene ID: k141_13074_6
Type: TC
Location: 3338 - 4024 (+)
Type: TC
Location: 3338 - 4024 (+)
Gene ID: k141_13074_7
Type: pfam
Location: 4014 - 4922 (+)
Type: pfam
Location: 4014 - 4922 (+)
Gene ID: k141_13074_8
Type: TC
Location: 4950 - 6110 (+)
Type: TC
Location: 4950 - 6110 (+)
Gene ID: k141_13074_9
Type: TC
Location: 6142 - 7317 (+)
Type: TC
Location: 6142 - 7317 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Dorea_A
Species
Dorea_A amylophila
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_13074_5 | vegetarian > vegan | 1.19687 | 0.00110 |