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Cluster: CGMR033333_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_119112 k141_119112_104 111820 112263 + 4.A.6.1.16
pfam k141_119112 k141_119112_105 112263 112544 + YajC
TC k141_119112 k141_119112_106 112581 113063 + 4.A.6.1.4
TC k141_119112 k141_119112_107 113154 113954 + 4.A.6.1.4
TC k141_119112 k141_119112_108 113944 115026 + 4.A.6.1.4
TF k141_119112 k141_119112_109 115212 115943 + GntR
STP k141_119112 k141_119112_110 116058 117224 + SIS | SIS
CAZyme k141_119112 k141_119112_111 117345 118514 + CE9
Gene ID: k141_119112_104
Type: TC
Location: 111820 - 112263 (+)
Gene ID: k141_119112_105
Type: pfam
Location: 112263 - 112544 (+)
Gene ID: k141_119112_106
Type: TC
Location: 112581 - 113063 (+)
Gene ID: k141_119112_107
Type: TC
Location: 113154 - 113954 (+)
Gene ID: k141_119112_108
Type: TC
Location: 113944 - 115026 (+)
Gene ID: k141_119112_109
Type: TF
Location: 115212 - 115943 (+)
Gene ID: k141_119112_110
Type: STP
Location: 116058 - 117224 (+)
Gene ID: k141_119112_111
Type: CAZyme
Location: 117345 - 118514 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_119112_105 vegan > omnivore 1.07652 0.00701

🧭 Explore Read Mapping of CGC

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