dbCAN Logo

Cluster: CGMR033333_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_238240 k141_238240_5 8088 10538 - 4.A.1.1.8
NULL(UNKNOWN) k141_238240 k141_238240_6 10560 10679 + NULL(UNKNOWN)
[View Structural Homologs]
TF k141_238240 k141_238240_7 10763 11482 + GntR
TC k141_238240 k141_238240_8 11789 13105 + 3.A.1.1.45
TC k141_238240 k141_238240_9 13193 14047 + 3.A.1.1.45
TC k141_238240 k141_238240_10 14047 14886 + 3.A.1.1.45
TC k141_238240 k141_238240_11 14955 16154 + 3.A.1.1.22
CAZyme k141_238240 k141_238240_12 16608 18875 - GT35
CAZyme k141_238240 k141_238240_13 19004 20509 - GH77
Gene ID: k141_238240_5
Type: TC
Location: 8088 - 10538 (-)
Gene ID: k141_238240_6
Type:
Location: 10560 - 10679 (+)
Gene ID: k141_238240_7
Type: TF
Location: 10763 - 11482 (+)
Gene ID: k141_238240_8
Type: TC
Location: 11789 - 13105 (+)
Gene ID: k141_238240_9
Type: TC
Location: 13193 - 14047 (+)
Gene ID: k141_238240_10
Type: TC
Location: 14047 - 14886 (+)
Gene ID: k141_238240_11
Type: TC
Location: 14955 - 16154 (+)
Gene ID: k141_238240_12
Type: CAZyme
Location: 16608 - 18875 (-)
Gene ID: k141_238240_13
Type: CAZyme
Location: 19004 - 20509 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List