Cluster: CGMR033333_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR033333
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_120299 | k141_120299_33 | 36908 | 39247 | - | 3.A.3.5.15 |
| TC | k141_120299 | k141_120299_34 | 39807 | 42056 | + | 1.I.1.1.3 |
| STP | k141_120299 | k141_120299_35 | 42680 | 43441 | + | Fer4 |
| TC | k141_120299 | k141_120299_36 | 43722 | 44234 | + | 4.A.1.2.5 |
| pfam | k141_120299 | k141_120299_37 | 44253 | 45107 | + | PRD | PRD | CAT_RBD |
| TC | k141_120299 | k141_120299_38 | 45207 | 46823 | + | 4.A.1.1.3 |
| CAZyme | k141_120299 | k141_120299_39 | 46827 | 48209 | + | GH4 |
Gene ID: k141_120299_33
Type: TC
Location: 36908 - 39247 (-)
Type: TC
Location: 36908 - 39247 (-)
Gene ID: k141_120299_34
Type: TC
Location: 39807 - 42056 (+)
Type: TC
Location: 39807 - 42056 (+)
Gene ID: k141_120299_35
Type: STP
Location: 42680 - 43441 (+)
Type: STP
Location: 42680 - 43441 (+)
Gene ID: k141_120299_36
Type: TC
Location: 43722 - 44234 (+)
Type: TC
Location: 43722 - 44234 (+)
Gene ID: k141_120299_37
Type: pfam
Location: 44253 - 45107 (+)
Type: pfam
Location: 44253 - 45107 (+)
Gene ID: k141_120299_38
Type: TC
Location: 45207 - 46823 (+)
Type: TC
Location: 45207 - 46823 (+)
Gene ID: k141_120299_39
Type: CAZyme
Location: 46827 - 48209 (+)
Type: CAZyme
Location: 46827 - 48209 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900543945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.