Cluster: CGMR033333_CGC17
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR033333
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_87830 | k141_87830_32 | 31262 | 32725 | + | 2.A.3.2.3 |
| NULL(UNKNOWN) | k141_87830 | k141_87830_33 | 33188 | 33508 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_87830 | k141_87830_34 | 33630 | 35990 | + | 9.A.8.1.6 |
| TC | k141_87830 | k141_87830_35 | 36115 | 37311 | + | 2.A.1.2.18 |
| CAZyme | k141_87830 | k141_87830_36 | 37465 | 38841 | + | GH13_20 |
Gene ID: k141_87830_32
Type: TC
Location: 31262 - 32725 (+)
Type: TC
Location: 31262 - 32725 (+)
Gene ID: k141_87830_33
Type:
Location: 33188 - 33508 (+)
Type:
Location: 33188 - 33508 (+)
Gene ID: k141_87830_34
Type: TC
Location: 33630 - 35990 (+)
Type: TC
Location: 33630 - 35990 (+)
Gene ID: k141_87830_35
Type: TC
Location: 36115 - 37311 (+)
Type: TC
Location: 36115 - 37311 (+)
Gene ID: k141_87830_36
Type: CAZyme
Location: 37465 - 38841 (+)
Type: CAZyme
Location: 37465 - 38841 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900543945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_87830_32 | vegan > omnivore | 1.46661 | 0.00701 |